PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aradu.99532
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family bHLH
Protein Properties Length: 181aa    MW: 19760.3 Da    PI: 8.5067
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aradu.99532genomeNCGR_PGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH42.41.3e-133778955
                 HHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
          HLH  9 ErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55
                  rrRR+riN+++  L+ l+P++      K +Ka++L +A+eY+k+Lq
  Aradu.99532 37 NRRRRSRINEKMKALQNLIPNS-----NKTDKASMLDEAIEYLKQLQ 78
                 69*******************7.....5******************9 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088815.5992877IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003534.1E-143483IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.108.2E-183588IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474592.36E-173588IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000105.3E-113778IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000832.92E-153882No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 181 aa     Download sequence    Send to blast
MGGCNGGSFP CDSSEDFSAL FNQLLSPPPQ PNLTITNRRR RSRINEKMKA LQNLIPNSNK  60
TDKASMLDEA IEYLKQLQLQ VQMLMMRNGL SLHPMSLPGG LRPMILPHTG VDFDEGNRFQ  120
NSINGGASSS YTADESLVAR SPFGFHRPCS ISNQSAAMPS LTNLATSDNS SSFQSSIKVH  180
V
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankBT1477275e-56BT147727.1 Lotus japonicus clone JCVI-FLLj-8F4 unknown mRNA.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015972381.11e-87PREDICTED: transcription factor SPATULA-like
SwissprotQ9FUA41e-32SPT_ARATH; Transcription factor SPATULA
TrEMBLK7MNP25e-64K7MNP2_SOYBN; Uncharacterized protein
TrEMBLA0A0R0FQU76e-64A0A0R0FQU7_SOYBN; Uncharacterized protein
TrEMBLA0A0B2PYQ06e-64A0A0B2PYQ0_GLYSO; Transcription factor SPATULA
TrEMBLA0A0B2RMD16e-64A0A0B2RMD1_GLYSO; Transcription factor SPATULA
TrEMBLK7M5M66e-64K7M5M6_SOYBN; Uncharacterized protein
TrEMBLK7M5M76e-64K7M5M7_SOYBN; Uncharacterized protein
STRINGGLYMA14G09231.12e-63(Glycine max)
STRINGGLYMA17G35951.12e-63(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF22763379
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G36930.11e-19bHLH family protein